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Picard2.27.2 by Sourceforge |
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Software Description:
Picard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported. ...
type: Open Source
Download Picardcategories: Sequence Alignment Map, bioinformatics tool, BAM manipulation, sequence, bioinformatics, manipulate Add to Download Basket Report virus or spyware |
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| Software Info | |
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Best Vista Download periodically updates pricing and software information of Picard full version from the publisher,
but some information may be out-of-date. You should confirm all information. Software piracy is theft, using crack, warez passwords, patches, serial numbers, registration codes, key generator, keymaker or keygen for Picard license key is illegal and prevent future development of Picard. Download links are directly from our mirrors or publisher's website, Picard torrent files or shared files from rapidshare, yousendit or megaupload are not allowed! |
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| Released: | May 25, 2022 |
| Filesize: | 16.60 MB |
| Platform: | Windows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64, Windows 8, Windows 8 x64, Windows 10, Windows 10 x64, Windows 11 |
| Install | Instal And Uninstall |
| Add Your Review or Windows Vista Compatibility Report |
Picard- Releases History |
| Software: | Picard 2.27.2 |
| Date Released: | May 25, 2022 |
| Status: | New Release |
| Software: | Picard 2.20.7 |
| Date Released: | Sep 16, 2019 |
| Status: | New Release |
| Release Notes: | Initial Move Calculate the detail metric correctly (on a per-genotype basis). Add more tests Add test to handle multi-sample VCF Refactor detail->summary metrics accumulation. Fix CreateVerifyIDIntensityContaminationMetricsFile to handle LLK and LLK0 as doubles. Added new metric, refined naming of others. Enhanced multiple sample tests. Updating gradle to 5.6 (#1380) Updating NIO dependency and fixing a dependency issue (#1391) Update to htsjdk 2.20.3 (#1381) Extend travis build matrix to separate Barclay tests from legacy tests. (#952) PO-18867 Catch NaN Percent_Duplication edge case (#1389) |
| Software: | Picard 1.119 |
| Date Released: | Sep 2, 2014 |
| Status: | New Release |
| Release Notes: | Updated AbstractOpticalDuplicateFinder to handle post-CASAVA 1.8 read names. Pass READ_NAME_REGEX=null to skip optical duplicate detection in MarkDuplicates. Fixed RevertSam to harmonize different quality score encoding schemes when the sanitize option is set. Modified Casava18ReadNameEncoder to correctly display filter status. SamPairUtil: Added the ability to set the mate cigar tag on supplementary alignments. Updated AbstractAlignmentMerger to set mate cigars when merging supplementary alignments. CollectWgsMetrics: Added 2 new metrics- the fraction of bases attaining 15X and 25X coverage respectively. Added a new tool, CollectBaseDistributionByCycle, that computes the nucleotide distribution per cycle. FileAppendStreamLRUCache: Added wrapping of FileOutputStreams with BufferedOutputStreams. Fixed a bug in BCF2Writer where it was double-closing the output stream. Fixed VariantContext to ignore symbolic alleles when running strict validation for a VCF. |
Most popular sequence alignment in CAD downloads for Vista |
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Geneious PRO for Vista 4.7.6 download by Biomatters Ltd
... sharing, and exploring biological data such as DNA sequences or proteins, phylogenies, 3D structure information, publications, etc. It features sequence alignment and phylogenetic analysis, contig assembly, primer design and ... work that Geneious Pro can do for you. Sequence Analysis: * Pairwise and multiple sequence alignment ...
type: Trialware ($249.00)
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categories: molecular biology, biochemistry research, molecular research, bioinformatics, biology, research |
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Geneious PRO 6.0.4 download by Biomatters Ltd
... sharing, and exploring biological data such as DNA sequences or proteins, phylogenies, 3D structure information, publications, etc. It features sequence alignment and phylogenetic analysis, contig assembly, primer design and ... work that Geneious Pro can do for you. Sequence Analysis: * Pairwise and multiple sequence alignment ...
type: Trialware ($249.00)
View Details
Download
categories: molecular biology, biochemistry research, molecular research, bioinformatics, biology, research |
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Geneious PRO x64 6.0.4 download by Biomatters Ltd
... sharing, and exploring biological data such as DNA sequences or proteins, phylogenies, 3D structure information, publications, etc. It features sequence alignment and phylogenetic analysis, contig assembly, primer design and ... work that Geneious Pro can do for you. Sequence Analysis: * Pairwise and multiple sequence alignment ...
type: Trialware ($249.00)
View Details
Download
categories: x64 molecular biology, x64 biochemistry research, x64 molecular research, x64 bioinformatics, x64 biology, x64 research |
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Geneious Basic 6.0.4 download by Biomatters Ltd
... functions from publication or nucleotide searching through to sequence alignment and tree-building, and includes functions for extracting protein translations, sequence analysis and 3D structure visualization. Geneious lets ... set up agents to let new publications and sequences automatically find you, and eliminates the need for ...
type: Freeware
View Details
Download
categories: molecular biology, biochemistry research, molecular research, bioinformatics, biology, research |
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Geneious Basic x64 6.0.4 download by Biomatters Ltd
... functions from publication or nucleotide searching through to sequence alignment and tree-building, and includes functions for extracting protein translations, sequence analysis and 3D structure visualization. Geneious lets ... set up agents to let new publications and sequences automatically find you, and eliminates the need for ...
type: Freeware
View Details
Download
categories: x64 molecular biology, x64 biochemistry research, x64 molecular research, x64 bioinformatics, x64 biology, x64 research |
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miRPI 1.0 download by mail2vignesh1985
... is faster and generally follows AB initio and sequence alignment methods. Here we developed MIRPI, a new software ... finds highly conserved miRNAs from the given gene sequences by using non-repeated miRNAs of the users interest. ...
type: Freeware
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categories: find conserved miRNA, conserved miRNA finder, search conserved miRNA, analyze, analysis, find |
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JDet 1.4.1 download by Thilo Muth
... and visualization of function-related conservation patterns in multiple sequence alignments and structures. It contains the set of tools ... for extracting this kind of information from protein alignments. This software has been developed by Thilo ...
type: Open Source
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categories: protein alignment, view protein sequence, align protein sequence, visualization, align, alignment |
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Picard 2.27.2 download by Sourceforge
... such as SAM and VCF. SAM (Sequence Alignment/Map) format is a generic format for storing large nucleotide sequence alignments. Building Picard with a Custom Version of ...
type: Open Source
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categories: Sequence Alignment Map, bioinformatics tool, BAM manipulation, sequence, bioinformatics, manipulate |
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Primer Premier 6.25 download by PREMIER Biosoft
... properties before reporting the best ones for your sequence, in ranked order. Equipped with a handy calculator, you can easily manipulate sequences and analyze the results of your primer design. ... Assays With Primer Premier, you can load sequences from dbSNP and have the primers designed flanking ...
type: Demo
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categories: designed to provide scientists and molecular biology students |
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