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Picard2.27.2 by Sourceforge |
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Software Description:
Picard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported. ...
type: Open Source
Download Picardcategories: Sequence Alignment Map, bioinformatics tool, BAM manipulation, sequence, bioinformatics, manipulate Add to Download Basket Report virus or spyware |
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| Software Info | |
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Best Vista Download periodically updates pricing and software information of Picard full version from the publisher,
but some information may be out-of-date. You should confirm all information. Software piracy is theft, using crack, warez passwords, patches, serial numbers, registration codes, key generator, keymaker or keygen for Picard license key is illegal and prevent future development of Picard. Download links are directly from our mirrors or publisher's website, Picard torrent files or shared files from rapidshare, yousendit or megaupload are not allowed! |
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| Released: | May 25, 2022 |
| Filesize: | 16.60 MB |
| Platform: | Windows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64, Windows 8, Windows 8 x64, Windows 10, Windows 10 x64, Windows 11 |
| Install | Instal And Uninstall |
| Add Your Review or Windows Vista Compatibility Report |
Picard- Releases History |
| Software: | Picard 2.27.2 |
| Date Released: | May 25, 2022 |
| Status: | New Release |
| Software: | Picard 2.20.7 |
| Date Released: | Sep 16, 2019 |
| Status: | New Release |
| Release Notes: | Initial Move Calculate the detail metric correctly (on a per-genotype basis). Add more tests Add test to handle multi-sample VCF Refactor detail->summary metrics accumulation. Fix CreateVerifyIDIntensityContaminationMetricsFile to handle LLK and LLK0 as doubles. Added new metric, refined naming of others. Enhanced multiple sample tests. Updating gradle to 5.6 (#1380) Updating NIO dependency and fixing a dependency issue (#1391) Update to htsjdk 2.20.3 (#1381) Extend travis build matrix to separate Barclay tests from legacy tests. (#952) PO-18867 Catch NaN Percent_Duplication edge case (#1389) |
| Software: | Picard 1.119 |
| Date Released: | Sep 2, 2014 |
| Status: | New Release |
| Release Notes: | Updated AbstractOpticalDuplicateFinder to handle post-CASAVA 1.8 read names. Pass READ_NAME_REGEX=null to skip optical duplicate detection in MarkDuplicates. Fixed RevertSam to harmonize different quality score encoding schemes when the sanitize option is set. Modified Casava18ReadNameEncoder to correctly display filter status. SamPairUtil: Added the ability to set the mate cigar tag on supplementary alignments. Updated AbstractAlignmentMerger to set mate cigars when merging supplementary alignments. CollectWgsMetrics: Added 2 new metrics- the fraction of bases attaining 15X and 25X coverage respectively. Added a new tool, CollectBaseDistributionByCycle, that computes the nucleotide distribution per cycle. FileAppendStreamLRUCache: Added wrapping of FileOutputStreams with BufferedOutputStreams. Fixed a bug in BCF2Writer where it was double-closing the output stream. Fixed VariantContext to ignore symbolic alleles when running strict validation for a VCF. |
Most popular scripts such in CAD downloads for Vista |
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QFitsView 8.6 download by Eric Mandel
... crucial for identifying subtle features in astronomical images, such as faint galaxies or distant quasars. Additionally, DS9 ... interpretation. The integration of external analysis tools and scripts further extends its functionality, providing a bridge to ...
type: Open Source
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categories: data visualization, image analysis, Colormap Analysis, Astronomy, SAOImage DS9 free download, astronomy, Astronomy Visualization, software tool, download SAOImage DS9, Colormap, Eric Mandel, FITS, SAOImage DS9, Frame, FITS Viewer |
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Axdea 1.1.6 download by Innovacia Sdn Bhd
... Task Oriented Design: Specific tools for specific task such as arhictectural, mechanical, structural, drafting, simulation and many ... allow plugins to add more functionality using Python scripts or Macros. Record complex actions and replay for ...
type: Freeware
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categories: CAD, IBS, BIM, Architecture, Civil, Mechanical, CAE, Engineering, Graphic, Design |
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Myrtle 1.9.0 download by Daniel P. Dougherty
... build personal libraries containing their favorite functions and scripts allowing them to be reused again and again ... a gentle introduction to some basic programming concepts such as control flow, conditional execution, and object-oriented programming ...
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categories: data analysis, statistics function, spreadsheet data analysis, analyze, analysis, spreadsheet |
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MOPlot 1.93 download by Sourceforge
... calculations, and input to the Molden viewing utility, such as it is for example generated by the ... to their favorite quantum chemical program should write scripts that convert the output of that program into ...
type: Freeware
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categories: molecular orbital plotting, compute geometric parameters, molecular orbitals, visualization, molecule, orbital |
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Picard 2.27.2 download by Sourceforge
... that are commonly used for high-throughput sequencing data such as SAM and VCF. SAM (Sequence Alignment/Map) format is a generic format for storing large nucleotide sequence alignments. Building ...
type: Open Source
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categories: Sequence Alignment Map, bioinformatics tool, BAM manipulation, sequence, bioinformatics, manipulate |
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