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Picard2.27.2 by Sourceforge |
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Software Description:
... and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported. ...
type: Open Source
Download Picardcategories: Sequence Alignment Map, bioinformatics tool, BAM manipulation, sequence, bioinformatics, manipulate Add to Download Basket Report virus or spyware |
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| Software Info | |
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Best Vista Download periodically updates pricing and software information of Picard full version from the publisher,
but some information may be out-of-date. You should confirm all information. Software piracy is theft, using crack, warez passwords, patches, serial numbers, registration codes, key generator, keymaker or keygen for Picard license key is illegal and prevent future development of Picard. Download links are directly from our mirrors or publisher's website, Picard torrent files or shared files from rapidshare, yousendit or megaupload are not allowed! |
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| Released: | May 25, 2022 |
| Filesize: | 16.60 MB |
| Platform: | Windows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64, Windows 8, Windows 8 x64, Windows 10, Windows 10 x64, Windows 11 |
| Install | Instal And Uninstall |
| Add Your Review or Windows Vista Compatibility Report |
Picard- Releases History |
| Software: | Picard 2.27.2 |
| Date Released: | May 25, 2022 |
| Status: | New Release |
| Software: | Picard 2.20.7 |
| Date Released: | Sep 16, 2019 |
| Status: | New Release |
| Release Notes: | Initial Move Calculate the detail metric correctly (on a per-genotype basis). Add more tests Add test to handle multi-sample VCF Refactor detail->summary metrics accumulation. Fix CreateVerifyIDIntensityContaminationMetricsFile to handle LLK and LLK0 as doubles. Added new metric, refined naming of others. Enhanced multiple sample tests. Updating gradle to 5.6 (#1380) Updating NIO dependency and fixing a dependency issue (#1391) Update to htsjdk 2.20.3 (#1381) Extend travis build matrix to separate Barclay tests from legacy tests. (#952) PO-18867 Catch NaN Percent_Duplication edge case (#1389) |
| Software: | Picard 1.119 |
| Date Released: | Sep 2, 2014 |
| Status: | New Release |
| Release Notes: | Updated AbstractOpticalDuplicateFinder to handle post-CASAVA 1.8 read names. Pass READ_NAME_REGEX=null to skip optical duplicate detection in MarkDuplicates. Fixed RevertSam to harmonize different quality score encoding schemes when the sanitize option is set. Modified Casava18ReadNameEncoder to correctly display filter status. SamPairUtil: Added the ability to set the mate cigar tag on supplementary alignments. Updated AbstractAlignmentMerger to set mate cigars when merging supplementary alignments. CollectWgsMetrics: Added 2 new metrics- the fraction of bases attaining 15X and 25X coverage respectively. Added a new tool, CollectBaseDistributionByCycle, that computes the nucleotide distribution per cycle. FileAppendStreamLRUCache: Added wrapping of FileOutputStreams with BufferedOutputStreams. Fixed a bug in BCF2Writer where it was double-closing the output stream. Fixed VariantContext to ignore symbolic alleles when running strict validation for a VCF. |
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MOPlot 1.93 download by Sourceforge
... course of a geometry optimization or a "scan" run (similar to Molden). The geometry at each step ... can thus be imported into most current drawing programs (Adobe Illustrator, CorelDraw ?) for further processing. · ...
type: Freeware
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categories: molecular orbital plotting, compute geometric parameters, molecular orbitals, visualization, molecule, orbital |
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Picard 2.27.2 download by Sourceforge
... and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM ... short git commit hash. In your Picard clone, run ./gradlew shadowJar -Dhtsjdk.version=VERSION, where VERSION is the version ...
type: Open Source
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categories: Sequence Alignment Map, bioinformatics tool, BAM manipulation, sequence, bioinformatics, manipulate |
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MuniWin 2.1.13 download by David Motl
... stars. Each step of reduction process can be run from the command line or via simple and ... project follows up with the Munipack package, the programs and tools have the same name, but in ...
type: Open Source
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... as well. ABSORB-7 and ABSORB-GUI to run it can be installed by downloading and running ... We recommend that you install the programs in a separate folder, and not in the ...
type: Freeware
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categories: crystal absorption calculator, calculate absorption rate, simulate crystal absorption, crystal, analyze, calculate |
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... dimensioning steel in 2D and 3D. 2D3DSteel will run in any version of Full AutoCAD. It will not run on the LT versions of AutoCAD. All of ...
type: Shareware ($149.95)
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categories: structural, steel, detailing, estimating, dimensions, design, properties, software, reference, tools, construction, reference, information, engineering, fabrication, fabricator, drafting, architecture, beam, column, CAD, drawings, detailing, architect, computer, programs |
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... Additional commands also allows one to create demonstration programs, computer assisted teaching lessons, and even computer assisted ... such as IF-THEN-ELSE statements, GOTO or GOSUB commands, RUN command to run external programs, etc. - ...
type: Demo ($695.00)
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SketchEl 1.60 download by Alex M. Clark
... OS X. The single-molecule editing feature can be run as a Java Applet within a web page, ... underlying molecule contents can be manipulated by JavaScript programs. Features : Easy to use interactive ...
type: Open Source
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categories: chemical structure, cheminformatics application, edit chemical structure, editor, edit, chemical |
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jHepWork 3.9 download by Dr. Sergei Chekanov
... as desktops, laptops, netbooks, production servers. It can run in either a GUI-driven mode, or a batch ... which have no analogy in other data-analysis software. Programs written using the jHepWork framework are very short, ...
type: Freeware
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categories: data-analysis framework, data manipulation, data plotting, analyze, analysis, analyzer |
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... Complex, Vectors, Matrices, Binaries, Lists, Expressions, Strings and Programs. Implements RPL, the HP programming language of HP-28 and HP-48 series. ...
type: Open Source
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categories: math calculator, mathematics calculator, math calculation, calculator, calculate, calculation |
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SCaVis 2.3 download by Dr. Sergei Chekanov
... which have no analogy in other data-analysis software. Programs written using the SCaVis framework are very short, ... high-level constructions of the jHPlot package. It can run in either a GUI-driven mode or a batch ...
type: Freeware
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categories: data-analysis framework, data manipulation, data plotting, analyze, analysis, analyzer |
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