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Picard2.27.2 by Sourceforge |
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Software Description:
Picard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported. ...
type: Open Source
Download Picardcategories: Sequence Alignment Map, bioinformatics tool, BAM manipulation, sequence, bioinformatics, manipulate Add to Download Basket Report virus or spyware |
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| Software Info | |
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Best Vista Download periodically updates pricing and software information of Picard full version from the publisher,
but some information may be out-of-date. You should confirm all information. Software piracy is theft, using crack, warez passwords, patches, serial numbers, registration codes, key generator, keymaker or keygen for Picard license key is illegal and prevent future development of Picard. Download links are directly from our mirrors or publisher's website, Picard torrent files or shared files from rapidshare, yousendit or megaupload are not allowed! |
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| Released: | May 25, 2022 |
| Filesize: | 16.60 MB |
| Platform: | Windows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64, Windows 8, Windows 8 x64, Windows 10, Windows 10 x64, Windows 11 |
| Install | Instal And Uninstall |
| Add Your Review or Windows Vista Compatibility Report |
Picard- Releases History |
| Software: | Picard 2.27.2 |
| Date Released: | May 25, 2022 |
| Status: | New Release |
| Software: | Picard 2.20.7 |
| Date Released: | Sep 16, 2019 |
| Status: | New Release |
| Release Notes: | Initial Move Calculate the detail metric correctly (on a per-genotype basis). Add more tests Add test to handle multi-sample VCF Refactor detail->summary metrics accumulation. Fix CreateVerifyIDIntensityContaminationMetricsFile to handle LLK and LLK0 as doubles. Added new metric, refined naming of others. Enhanced multiple sample tests. Updating gradle to 5.6 (#1380) Updating NIO dependency and fixing a dependency issue (#1391) Update to htsjdk 2.20.3 (#1381) Extend travis build matrix to separate Barclay tests from legacy tests. (#952) PO-18867 Catch NaN Percent_Duplication edge case (#1389) |
| Software: | Picard 1.119 |
| Date Released: | Sep 2, 2014 |
| Status: | New Release |
| Release Notes: | Updated AbstractOpticalDuplicateFinder to handle post-CASAVA 1.8 read names. Pass READ_NAME_REGEX=null to skip optical duplicate detection in MarkDuplicates. Fixed RevertSam to harmonize different quality score encoding schemes when the sanitize option is set. Modified Casava18ReadNameEncoder to correctly display filter status. SamPairUtil: Added the ability to set the mate cigar tag on supplementary alignments. Updated AbstractAlignmentMerger to set mate cigars when merging supplementary alignments. CollectWgsMetrics: Added 2 new metrics- the fraction of bases attaining 15X and 25X coverage respectively. Added a new tool, CollectBaseDistributionByCycle, that computes the nucleotide distribution per cycle. FileAppendStreamLRUCache: Added wrapping of FileOutputStreams with BufferedOutputStreams. Fixed a bug in BCF2Writer where it was double-closing the output stream. Fixed VariantContext to ignore symbolic alleles when running strict validation for a VCF. |
Most popular java file tool in CAD downloads for Vista |
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Mobile Atlas Creator 2.2.1 download by Fredrik Moller
... as one large PNG image with calibration MAP file for OziExplorer. As source for an offline atlas ... Trail Explorer (J2ME) - single tiles and MTECache file NaviComputer (Windows Mobile) nfComPass (WinCE, WinMobile, WinXP) OruxMaps ...
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GenomeView 2450 download by Thomas Abeel
... mappings, short read alignments and more. Many standard file formats are supported and new functionality can be added using a plugin system. ...
type: Open Source
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categories: genome visualization, annotation editor, view genome file, viewer, view, visualization |
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OpenRocket 14.06 download by Sampo Niskanen
... General Fully cross-platform, written in Java Fully documented simulation methods Open Source, source code ... configurations Simulation data can be exported to CSV files for further analysis Simulation listeners allowing custom-made code ...
type: Open Source
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categories: create rocket, design rocket, rocket simulator, rocket, generate, design |
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SketchEl 1.60 download by Alex M. Clark
SketchEl is an interactive chemical molecule sketching tool, and molecular spreadsheet data entry application. The feature ... conveniently edit diagram representations of small molecule structures. Toolbars, templates, mouse gestures, keyboard shortcuts, utility commands and ...
type: Open Source
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categories: chemical structure, cheminformatics application, edit chemical structure, editor, edit, chemical |
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jHepWork 3.9 download by Dr. Sergei Chekanov
... jHepWork has a goal of creating a tool competitive to commercial scientific packages. The program can ... fully multiplatform since it is a 100% pure Java package. It runs on any platform where Java ...
type: Freeware
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categories: data-analysis framework, data manipulation, data plotting, analyze, analysis, analyzer |
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SDMetrics 2.5 download by Jürgen Wüst
... to a design problem. Interoperability with UML tools: · SDMetrics is designed to work with all UML modeling tools with XMI export. SDMetrics supports all XMI ... to deal with proprietary UML metamodel extensions, and tools that deviate from XMI standards. · Use SDMetrics ...
type: Freeware
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categories: analyze structural property, design metrics, establish benchmark, analyzer, analyze, measurement |
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Picard 2.27.2 download by Sourceforge
Picard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) ...
type: Open Source
View Details
Download
categories: Sequence Alignment Map, bioinformatics tool, BAM manipulation, sequence, bioinformatics, manipulate |
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