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Picard2.27.2 by Sourceforge |
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Software Description:
Picard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported. ...
type: Open Source
Download Picardcategories: Sequence Alignment Map, bioinformatics tool, BAM manipulation, sequence, bioinformatics, manipulate Add to Download Basket Report virus or spyware |
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| Software Info | |
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Best Vista Download periodically updates pricing and software information of Picard full version from the publisher,
but some information may be out-of-date. You should confirm all information. Software piracy is theft, using crack, warez passwords, patches, serial numbers, registration codes, key generator, keymaker or keygen for Picard license key is illegal and prevent future development of Picard. Download links are directly from our mirrors or publisher's website, Picard torrent files or shared files from rapidshare, yousendit or megaupload are not allowed! |
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| Released: | May 25, 2022 |
| Filesize: | 16.60 MB |
| Platform: | Windows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64, Windows 8, Windows 8 x64, Windows 10, Windows 10 x64, Windows 11 |
| Install | Instal And Uninstall |
| Add Your Review or Windows Vista Compatibility Report |
Picard- Releases History |
| Software: | Picard 2.27.2 |
| Date Released: | May 25, 2022 |
| Status: | New Release |
| Software: | Picard 2.20.7 |
| Date Released: | Sep 16, 2019 |
| Status: | New Release |
| Release Notes: | Initial Move Calculate the detail metric correctly (on a per-genotype basis). Add more tests Add test to handle multi-sample VCF Refactor detail->summary metrics accumulation. Fix CreateVerifyIDIntensityContaminationMetricsFile to handle LLK and LLK0 as doubles. Added new metric, refined naming of others. Enhanced multiple sample tests. Updating gradle to 5.6 (#1380) Updating NIO dependency and fixing a dependency issue (#1391) Update to htsjdk 2.20.3 (#1381) Extend travis build matrix to separate Barclay tests from legacy tests. (#952) PO-18867 Catch NaN Percent_Duplication edge case (#1389) |
| Software: | Picard 1.119 |
| Date Released: | Sep 2, 2014 |
| Status: | New Release |
| Release Notes: | Updated AbstractOpticalDuplicateFinder to handle post-CASAVA 1.8 read names. Pass READ_NAME_REGEX=null to skip optical duplicate detection in MarkDuplicates. Fixed RevertSam to harmonize different quality score encoding schemes when the sanitize option is set. Modified Casava18ReadNameEncoder to correctly display filter status. SamPairUtil: Added the ability to set the mate cigar tag on supplementary alignments. Updated AbstractAlignmentMerger to set mate cigars when merging supplementary alignments. CollectWgsMetrics: Added 2 new metrics- the fraction of bases attaining 15X and 25X coverage respectively. Added a new tool, CollectBaseDistributionByCycle, that computes the nucleotide distribution per cycle. FileAppendStreamLRUCache: Added wrapping of FileOutputStreams with BufferedOutputStreams. Fixed a bug in BCF2Writer where it was double-closing the output stream. Fixed VariantContext to ignore symbolic alleles when running strict validation for a VCF. |
Most popular java 6 in CAD downloads for Vista |
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SDMetrics 2.5 download by Jürgen Wüst
... engineering tools that produce XMI files from C++, Java, Delphi, or Smalltalk source code, .NET assemblies, etc., to perform design measurement on such sources. Data export: · Design measures ...
type: Freeware
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categories: analyze structural property, design metrics, establish benchmark, analyzer, analyze, measurement |
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Sweet Home 3D 7.4 download by Sweethome3d
... of Sweet Home 3D with plug-ins programmed in Java, or by developing a derived version based on its Model View Controller architecture. Choose the language displayed in the user ...
type: Open Source
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categories: interior design, interior design software, placing your furniture, free interior design software, 2D plan, 3D plan, 3D preview, free interior design, SweetHome 3D |
  
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Circular Layout 0.3 download by Matthew Groeninger
... ID. *Order nodes in random order (using the Java "Collections.shuffle" which should be a Fisher–Yates shuffle). *Order nodes by degree. *Allows drawing node order on circle either clockwise or counter-clockwise. ...
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jAGN 1.02 download by Fabricio M. Lopes
jAGN is a small, Java based application specially designed to offer you a model generation through theoretical models of complex networks, which is used to simulate temporal expression data, which ...
type: Freeware
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categories: artificial gene networks generation, generate artificial gene networks, complex network model, create, generate, generator |
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GNomEx 5.3.2 download by Robb Cundick&David Nix
GNomEx is Genomic LIMS and Analysis Project Center designed by the Huntsman Cancer Institute for use by microarray and next generation sequencing core facilities and large research laboratories. KWs: Illumina, Affymetrix, ...
type: Open Source
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categories: microarray sequence, research laboratory, genomic LIMS, microarray, sequence, genome |
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JigCell for Windows 7.1.0 download by Jason Zwolak
JigCell is an effort to develop and maintain an open source modeling environment for computational biology. The goal of this project is to support building and testing models for studying complex ...
type: Open Source
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categories: development environment, computational biology development, biochemical regulatory system, development, environment, biology |
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Cytoscape 3.9.0 download by Cytoscape Consortium
... anyone using the Cytoscape open API based on Java™ technology and plugin community development is encouraged. Most of the plugins are freely available. Cytoscape supports a lot of standard ...
type: Open Source
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categories: molecular interaction network, molecule visualization, bioinformatics viewer, visualization, molecule, Biology |
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DXF Export Java 7 download by CADSoftTools
Cross-platform developer Java library for exporting CAD entities, along with their ... line styles and other important properties. DXF Export Java with source code and working demos will help you get ...
type: Shareware ($900.00)
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categories: DXF, Java, dxf in java, export dxf java, dxf export java, java dxf export, java dxf exporter, Export, Exporter, CAD, library, sdk, AutoCAD, output |
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Geneious Basic 6.0.4 download by Biomatters Ltd
... Plugins: · Free plugins for extended functionality, Public Java API (application programming interface) for developing your own plugins ...
type: Freeware
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categories: molecular biology, biochemistry research, molecular research, bioinformatics, biology, research |
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Geneious Basic x64 6.0.4 download by Biomatters Ltd
... Plugins: · Free plugins for extended functionality, Public Java API (application programming interface) for developing your own plugins ...
type: Freeware
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categories: x64 molecular biology, x64 biochemistry research, x64 molecular research, x64 bioinformatics, x64 biology, x64 research |
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