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Navigation: Home \ Graphic Apps \ CAD \ SiBELia

SiBELia

 3.0.6   by Nikolay Vyahhi, Ilya Minkin

Vista Compatible
Software Description:
... will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms. ...
type: Open Source
categories: genome analyzer, analyze genome, genome finder, genome, analyzer, gene
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Best Vista Download periodically updates pricing and software information of SiBELia full version from the publisher, but some information may be out-of-date. You should confirm all information.
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Released: January 21, 2015
Filesize: 5.40 MB
Platform: Windows XP, Windows Vista, Windows 7, Windows 8
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SiBELia

- Releases History
Software: SiBELia 3.0.6
Date Released: Jan 21, 2015
Status: New Release
Release Notes: Fixed a bug with crash when 0 simplificaiont stages specified
When both --graphfile" and --visualize are set, graph is output at each stage
Added commandline option --noblocks
Software: SiBELia 3.0.5
Date Released: Jun 23, 2014
Status: New Release
Release Notes: Removed commandline options: -a, --alignment
Added commandline options: --maf
Added the third parameters set "far"
Changed permissions of LAGAN scripts to run on some platforms
Changed structure of the directory "share" (Linux platforms only)
Fixed a bug with misorder of aligned repeats (affected -a option of C-Sibelia only)
Fixed some compiler warnings yielded by LAGAN sources
Fixed a bug in hierarchy circos output that resulted in uncompilable configs for some datasets
Software: SiBELia 3.0.4
Date Released: Oct 5, 2013
Status: New Release
Release Notes: · Fixed a bug in C-Sibelia: incorrect reporting of variants within synteny blocks having opposite directions
· Added output of synteny blocks in GFF format
· Removed sequences without synteny blocks from Circos diagrams
· Blocks orientations are depicted on Circos diagram by different colors
· Added Sibelia cmd options: --nopostprocess, --allstages, --correctboundaries, gff, --lastk
· Added C-Sibelia cmd options: -o, -a
· C-Sibelia outputs whole genome alignments in XMFA format (-o flag)
· Slightly changed "fine" parameters simplification set


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SiBELia 3.0.6 download by Nikolay Vyahhi, Ilya Minkin
... will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms. ... (2) regions that present in one group of genomes but not in others, (3) rearrangements that transform ...
type: Open Source
categories: genome analyzer, analyze genome, genome finder, genome, analyzer, gene
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SiBELia

FONZIE 12.2010 download by Jonathan Grandaubert
... for markers via the external software Tandem Repeat Finder, 2) exclude user-defined specific genomic regions, 3) screen ... of each relevant marker found by Tandem Repeat Finder, 4) evaluate marker specificity (i.e., occurrence of the ...
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SiBELia x64 3.0.6 download by Nikolay Vyahhi, Ilya Minkin
... will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms. ... (2) regions that present in one group of genomes but not in others, (3) rearrangements that transform ...
View Details Download
SiBELia x64