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Picard2.27.2 by Sourceforge |
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Software Description:
Picard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported. ...
type: Open Source
Download Picardcategories: Sequence Alignment Map, bioinformatics tool, BAM manipulation, sequence, bioinformatics, manipulate Add to Download Basket Report virus or spyware |
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| Software Info | |
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Best Vista Download periodically updates pricing and software information of Picard full version from the publisher,
but some information may be out-of-date. You should confirm all information. Software piracy is theft, using crack, warez passwords, patches, serial numbers, registration codes, key generator, keymaker or keygen for Picard license key is illegal and prevent future development of Picard. Download links are directly from our mirrors or publisher's website, Picard torrent files or shared files from rapidshare, yousendit or megaupload are not allowed! |
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| Released: | May 25, 2022 |
| Filesize: | 16.60 MB |
| Platform: | Windows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64, Windows 8, Windows 8 x64, Windows 10, Windows 10 x64, Windows 11 |
| Install | Instal And Uninstall |
| Add Your Review or Windows Vista Compatibility Report |
Picard- Releases History |
| Software: | Picard 2.27.2 |
| Date Released: | May 25, 2022 |
| Status: | New Release |
| Software: | Picard 2.20.7 |
| Date Released: | Sep 16, 2019 |
| Status: | New Release |
| Release Notes: | Initial Move Calculate the detail metric correctly (on a per-genotype basis). Add more tests Add test to handle multi-sample VCF Refactor detail->summary metrics accumulation. Fix CreateVerifyIDIntensityContaminationMetricsFile to handle LLK and LLK0 as doubles. Added new metric, refined naming of others. Enhanced multiple sample tests. Updating gradle to 5.6 (#1380) Updating NIO dependency and fixing a dependency issue (#1391) Update to htsjdk 2.20.3 (#1381) Extend travis build matrix to separate Barclay tests from legacy tests. (#952) PO-18867 Catch NaN Percent_Duplication edge case (#1389) |
| Software: | Picard 1.119 |
| Date Released: | Sep 2, 2014 |
| Status: | New Release |
| Release Notes: | Updated AbstractOpticalDuplicateFinder to handle post-CASAVA 1.8 read names. Pass READ_NAME_REGEX=null to skip optical duplicate detection in MarkDuplicates. Fixed RevertSam to harmonize different quality score encoding schemes when the sanitize option is set. Modified Casava18ReadNameEncoder to correctly display filter status. SamPairUtil: Added the ability to set the mate cigar tag on supplementary alignments. Updated AbstractAlignmentMerger to set mate cigars when merging supplementary alignments. CollectWgsMetrics: Added 2 new metrics- the fraction of bases attaining 15X and 25X coverage respectively. Added a new tool, CollectBaseDistributionByCycle, that computes the nucleotide distribution per cycle. FileAppendStreamLRUCache: Added wrapping of FileOutputStreams with BufferedOutputStreams. Fixed a bug in BCF2Writer where it was double-closing the output stream. Fixed VariantContext to ignore symbolic alleles when running strict validation for a VCF. |
Most popular data source in CAD downloads for Vista |
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PyMOL 3.0.3 download by DeLano Scientific LLC
... colleagues exactly as intended. Using PyMOL, data can be represented in nearly 20 different ways. ... ANIMATE Molecules Dynamically EXPORT PyMOL Geometry PRESENT 3D Data with AxPyMOL DEVELOP with JyMOL ...
type: Shareware ($99.00)
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categories: molecular visualization, molecular model, 3D molecular structure, molecular, visualization, structure |
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Euler Math Toolbox 2024-01-14 download by Rene Grothmann
... or under Linux in Wine. Free and open source. FEATURES: Euler Language: · interactive ... calculation, · exact solutions of linear systems, · data type for sparse matrices, Programming Language: · ...
type: Open Source
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categories: math toolbox, numerical software, mathematical tool, math, mathematical, numeric |
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Open3DQSAR 2.24 download by Paolo Tosco
... training/test set combinations, superposition schemes, variable selection and data scrambling procedures, etc. High computational performance is attained ... molecular structures · Comprehensive output, including SDF molecular databases, 3D maps and many different plots to ease ...
type: Open Source
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categories: chemometric analysis, analyze MIF, pharmacophore exploration, MIF, analysis, chemometry |
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Gnuplot for Windows 5.2.7 download by Philipp K. Janert
... Windows, OSX, VMS, and many other platforms. The source code is copyrighted but freely distributed (i.e., you ... scientists and students to visualize mathematical functions and data interactively, but has grown to support many non-interactive ...
type: Open Source
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categories: portable, Gnuplot, Gnu plot, utility, graph plotter, plot graph, plotter, graph |
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QFitsView 8.6 download by Eric Mandel
... is a robust and versatile astronomical imaging and data visualization software that has become an indispensable tool ... Designed to handle the complex demands of astronomical data analysis, DS9 offers a comprehensive suite of features ...
type: Open Source
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categories: data visualization, image analysis, Colormap Analysis, Astronomy, SAOImage DS9 free download, astronomy, Astronomy Visualization, software tool, download SAOImage DS9, Colormap, Eric Mandel, FITS, SAOImage DS9, Frame, FITS Viewer |
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URG Benri 1.8.1 download by Mehrez Kristou
... used for viewing, recording and replaying URG sensor data. URG Benri is an application that allows its users to view sensor information, plot sensor data, record sensor data into files and replay log ...
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Picard 2.27.2 download by Sourceforge
... command line tools for manipulating high-throughput sequencing (HTS) data and formats. Picard is implemented using the ... formats that are commonly used for high-throughput sequencing data such as SAM and VCF. SAM (Sequence ...
type: Open Source
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categories: Sequence Alignment Map, bioinformatics tool, BAM manipulation, sequence, bioinformatics, manipulate |
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PreviSat 6.1.0.3 download by Astropedia
... of orbital elements from the Internet and uploading data from TXT, TLE, or GZ file format. ...
type: Open Source
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categories: track satellite, satellite tracker, satellite position, track, tracker, position |
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Fityk 1.3.1 download by Marcin Wojdyr
... nonlinear fitting of analytical functions (especially peak-shaped) to data (usually experimental data). There are also people using it to remove the baseline from data, or to display data only. Fityk is reportedly ...
type: Open Source
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categories: analytical functions, photoelectron spectroscopy, Raman spectroscopy, crystallography, analytical, chromatography |
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MITO 2.0 download by Giuseppe De Pietro
... MITO provides interaction techniques for manipulating 3D medical data in a virtual environment by 2 DOF input devices. FEATURES: · DICOM compliant · 2D / 3D / S3D ...
type: Open Source
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categories: view DICOM file, DICOM file viewer, image segmentation, display, view, viewer |
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